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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
58
ChIP-seq
23
ATAC-seq
Assay category
58
DNA binding
23
DNA accessibility
Transcription
Target of assay
50
histone
50
histone modification
30
broad histone mark
20
narrow histone mark
transcription factor
8
control
5
RNA binding protein
Date released
63
May, 2021
18
May, 2022
Available data
48
bed narrowPeak
38
bigWig
18
bam
18
fastq
Organism
81
Homo sapiens
Biosample type
33
primary cell
30
in vitro differentiated cells
18
tissue
Organ
18
pancreas
Project
T1D
81
AMP
Genome assembly (visualization)
56
hg19
Lab
1946
AMP-T2D consortium
147
Klaus Kaestner, Upenn
82
Katalin Susztak, Upenn
81
Kyle Gaulton, UCSD
20
Karen Mohlke, UNC
17
Bing Ren, UCSD
10
Rohit N. Kulkarni, M.D., Ph.D.
10
Xin Sun, UCSD
7
Struan F.A. Grant, CHOP
2
Mark McCarthy, Oxford
1
ITG
1
Maike Sander, UCSD
1
Stephen Parker, UMich
target.investigated_as!
transcription factor
award.project!
T1D
assay_slims!
Transcription
BIOSAMPLE
ASSAY
81 results
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ChIP-seq
ATAC-seq
primary cell
CD8-positive, alpha-beta T cell
33
in vitro differentiated cells
embryonic stem cell
25
5
tissue
islet of Langerhans
18
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