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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
41
WGBS
39
ATAC-seq
33
single cell RNA-seq
21
snATAC-seq
6
ChIP-seq
Assay category
60
DNA accessibility
41
DNA methylation
33
Transcription
6
DNA binding
Target of assay
3
RNA binding protein
3
control
3
histone
3
histone modification
3
narrow histone mark
transcription factor
Date released
206
May, 2021
147
May, 2020
134
May, 2022
88
February, 2023
73
September, 2018
59
September, 2020
57
August, 2017
51
June, 2019
48
February, 2021
48
July, 2018
43
April, 2018
34
October, 2019
31
July, 2019
8
January, 2021
7
August, 2020
6
November, 2017
6
November, 2020
5
December, 2019
5
September, 2017
4
August, 2021
4
May, 2019
3
August, 2018
3
June, 2018
3
October, 2022
2
October, 2018
1
March, 2020
1
March, 2023
1
November, 2018
Available data
134
zippedFastqFolder
6
bam
6
bigWig
6
fastq
3
bed broadPeak
3
bed narrowPeak
3
bigBed broadPeak
3
bigBed narrowPeak
Organism
140
Homo sapiens
Biosample type
148
tissue
140
primary cell
74
cell line
Organ
84
epithelium
80
pancreas
6
brain
4
vasculature
2
blood vessel
Project
134
HPAP
6
AMP
Genome assembly (visualization)
6
hg19
3
GRCh38
Lab
134
Klaus Kaestner, Upenn
6
AMP-T2D consortium
target.investigated_as!
transcription factor
BIOSAMPLE
ASSAY
140 results
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WGBS
ATAC-seq
single cell RNA-seq
snATAC-seq
ChIP-seq
primary cell
Langerhans cell
33
21
pancreatic alpha cell
25
22
pancreatic beta cell
16
13
pancreatic acinar cell
4
astrocyte of the cerebellum
2
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