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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
9
ChIP-seq
8
snATAC-seq
1
ATAC-seq
Assay category
9
DNA accessibility
9
DNA binding
Target of assay
transcription factor
10
RNA binding protein
10
chromatin remodeller
6
control
1
histone
1
histone modification
1
narrow histone mark
Date released
8
January, 2021
4
January, 2019
3
November, 2018
2
December, 2018
1
January, 2018
Available data
9
bam
9
fastq
4
bigWig
3
bed narrowPeak
3
bigBed narrowPeak
Organism
18
Homo sapiens
Biosample type
10
cell line
8
primary cell
Organ
889
pancreas
630
connective tissue
470
adipose tissue
464
epithelium
427
liver
338
heart
243
kidney
171
vasculature
169
blood vessel
159
bone element
153
brain
108
artery
50
musculature of body
35
eye
34
embryo
21
limb
20
lung
18
blood
18
bodily fluid
18
spleen
16
skeleton
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
nerve
1
ovary
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
1
vein
Project
10
AMP
8
T1D
Genome assembly (visualization)
4
hg19
3
GRCh38
Lab
10
AMP-T2D consortium
8
Kyle Gaulton, UCSD
target.investigated_as!
transcription factor
files.file_type!
bed broadPeak
month_released!
October, 2019
BIOSAMPLE
ASSAY
18 results
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Clear Filters
ChIP-seq
snATAC-seq
ATAC-seq
cell line
GM12878
9
1
primary cell
peripheral blood mononuclear cell
8
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