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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
27
ATAC-seq
5
total RNA-seq
2
ChIP-seq
1
RRBS
Assay category
27
DNA accessibility
5
Transcription
2
DNA binding
1
DNA methylation
Target of assay
1
RNA binding protein
1
control
1
histone
1
histone modification
1
narrow histone mark
transcription factor
Date released
31
February, 2023
October, 2019
2
June, 2019
1
February, 2020
1
July, 2019
Available data
32
bed narrowPeak
6
bam
5
bigBed narrowPeak
5
bigWig
5
tsv
4
bed bed3+
bed broadPeak
4
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
35
Homo sapiens
Biosample type
32
tissue
3
primary cell
Organ
889
pancreas
630
connective tissue
470
adipose tissue
464
epithelium
427
liver
338
heart
243
kidney
171
vasculature
169
blood vessel
159
bone element
153
brain
108
artery
50
musculature of body
35
eye
34
embryo
21
limb
20
lung
18
blood
18
bodily fluid
18
spleen
16
skeleton
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
nerve
1
ovary
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
1
vein
Project
35
AMP
Genome assembly (visualization)
29
hg19
1
GRCh38
Lab
35
AMP-T2D consortium
target.investigated_as!
transcription factor
files.file_type!
bed broadPeak
month_released!
October, 2019
BIOSAMPLE
ASSAY
35 results
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ATAC-seq
total RNA-seq
ChIP-seq
RRBS
tissue
retina
15
3
pigmented layer of retina
12
2
primary cell
retinal pigment epithelial cell
2
1
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