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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
9
ChIP-seq
8
snATAC-seq
1
ATAC-seq
Assay category
9
DNA accessibility
9
DNA binding
Target of assay
transcription factor
10
RNA binding protein
10
chromatin remodeller
6
control
1
histone
1
histone modification
1
narrow histone mark
Date released
8
January, 2021
4
January, 2019
3
November, 2018
2
December, 2018
1
January, 2018
Available data
9
bam
9
fastq
4
bigWig
3
bed narrowPeak
3
bigBed narrowPeak
Organism
18
Homo sapiens
Biosample type
10
cell line
8
primary cell
Organ
508
pancreas
340
epithelium
320
kidney
266
liver
257
brain
208
heart
159
vasculature
154
blood vessel
115
limb
101
bone element
96
connective tissue
87
musculature of body
78
artery
72
adipose tissue
55
eye
38
nerve
22
vein
19
lung
18
blood
18
bodily fluid
18
spleen
18
ureter
16
skeleton
4
gonad
4
ovary
2
pituitary gland
1
bone marrow
1
lymph node
1
pericardium
1
skin of body
1
thymus
Project
10
AMP
8
T1D
Genome assembly (visualization)
4
hg19
3
GRCh38
Lab
10
AMP-T2D consortium
8
Kyle Gaulton, UCSD
target.investigated_as!
transcription factor
files.file_type!
tsv
biosample_type!
in vitro differentiated cells
BIOSAMPLE
ASSAY
18 results
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Clear Filters
ChIP-seq
snATAC-seq
ATAC-seq
cell line
GM12878
9
1
primary cell
peripheral blood mononuclear cell
8
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