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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1
FAIRE-seq
1
Hi-C
Assay category
1
3D chromatin structure
1
DNA accessibility
Target of assay
transcription factor
1
RNA binding protein
Date released
1
March, 2019
1
October, 2019
Available data
2907
bam
2638
bigWig
1600
tsv
1313
bed narrowPeak
904
fastq
637
bigBed narrowPeak
389
tagAlign
273
bed broadPeak
254
bed bed3+
236
bigBed broadPeak
161
txt
153
zippedFastqFolder
64
xls
36
bed bedMethyl
36
bigBed bedMethyl
23
bedpe bed3+
23
hic
12
bed bed3
8
csv
7
bed bedgraph
5
hdf5
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
tar
1
vcf
Organism
2
Homo sapiens
Biosample type
1
primary cell
1
tissue
Organ
1
blood vessel
1
epithelium
1
pancreas
1
vasculature
1
vein
Project
2
AMP
Genome assembly (visualization)
2
hg19
Lab
1
AMP-T2D consortium
1
Bing Ren, UCSD
target.investigated_as!
transcription factor
BIOSAMPLE
ASSAY
2 results
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FAIRE-seq
Hi-C
primary cell
endothelial cell of umbilical vein
1
tissue
islet of Langerhans
1
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