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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
33
total RNA-seq
19
ATAC-seq
14
ChIP-seq
6
MeRIP-seq
3
CRISPR genome editing followed by DNA sequencing
2
Capture-C
2
HiChIP
1
CRISPR genome editing followed by sgRNA sequencing
1
Hi-C
Assay category
14
DNA binding
Target of assay
12
histone
12
histone modification
6
broad histone mark
6
narrow histone mark
2
control
1
RNA binding protein
transcription factor
Date released
12
November, 2019
1
March, 2020
1
May, 2021
Available data
14
bam
12
bed narrowPeak
12
bigWig
Organism
14
Homo sapiens
Biosample type
14
cell line
Organ
14
epithelium
14
pancreas
Project
12
AMP
2
T1D
Genome assembly (visualization)
12
GRCh38
12
hg19
Lab
14
AMP-T2D consortium
Audit category:
14
inconsistent ontology term
target.investigated_as!
transcription factor
lab.title!
Klaus Kaestner, Upenn
BIOSAMPLE
ASSAY
14 results
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ChIP-seq
cell line
EndoC_BH1
14
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