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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
75
ATAC-seq
49
total RNA-seq
11
single cell RNA-seq
6
snATAC-seq
1
Hi-C
Assay category
81
DNA accessibility
60
Transcription
1
3D chromatin structure
Date released
128
August, 2021
14
May, 2023
Available data
64
bed narrowPeak
64
xls
57
txt
1
hic
Organism
142
Homo sapiens
Biosample type
142
tissue
Organ
142
kidney
Project
142
AMP
Genome assembly (visualization)
75
GRCh38
1
hg19
Lab
3069
AMP-T2D consortium
331
Kyle Gaulton, UCSD
172
Klaus Kaestner, Upenn
142
Katalin Susztak, Upenn
47
KPMP
40
Karen Mohlke, UNC
35
Patrick T. Ellinor, Broad
27
Bing Ren, UCSD
19
Xin Sun, UCSD
Struan F.A. Grant, CHOP
4
Anna Gloyn, Oxford
4
Rohit N. Kulkarni, M.D., Ph.D.
2
Mark McCarthy, Oxford
1
ITG
1
Maike Sander, UCSD
1
Stephen Parker, UMich
target.investigated_as!
transcription factor
lab.title!
Struan F.A. Grant, CHOP
organ_slims!
epithelium
BIOSAMPLE
ASSAY
142 results
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ATAC-seq
total RNA-seq
single cell RNA-seq
snATAC-seq
Hi-C
tissue
kidney
75
49
11
6
1
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