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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
32
DNase-seq
3
ChIP-seq
Assay category
32
DNA accessibility
3
DNA binding
Target of assay
3
RNA binding protein
3
histone
3
histone modification
3
narrow histone mark
transcription factor
Date released
30
June, 2019
3
November, 2017
2
November, 2018
Available data
227
bam
203
bigWig
199
bed narrowPeak
123
bigBed narrowPeak
118
tagAlign
44
bed broadPeak
35
bigBed broadPeak
32
bed bed3+
18
fastq
15
tsv
1
bed bed3
1
tagAlign bed3+
Organism
35
Homo sapiens
Biosample type
27
tissue
8
primary cell
Organ
78
kidney
36
limb
35
brain
33
musculature of body
30
heart
20
epithelium
19
liver
18
ureter
15
vasculature
12
blood vessel
9
connective tissue
7
pancreas
4
artery
4
eye
4
vein
2
adipose tissue
2
nerve
1
spleen
Project
35
AMP
Genome assembly (visualization)
35
GRCh38
25
hg19
Lab
35
AMP-T2D consortium
target.investigated_as!
transcription factor
month_released!
July, 2019
BIOSAMPLE
ASSAY
35 results
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DNase-seq
ChIP-seq
tissue
brain
14
frontal cortex
2
Ammon's horn
1
caudate nucleus
1
cerebellar cortex
1
+ See 8 more…
primary cell
astrocyte of the cerebellum
1
1
brain microvascular endothelial cell
1
1
choroid plexus epithelial cell
1
1
astrocyte of the hippocampus
1
brain pericyte
1
See all biosamples
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