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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
total RNA-seq
149
ChIP-seq
34
ATAC-seq
17
pCHi-C
1
DNAme array
Assay category
149
DNA binding
34
DNA accessibility
1
DNA methylation
Target of assay
140
histone
140
histone modification
76
broad histone mark
64
narrow histone mark
transcription factor
9
control
5
RNA binding protein
Date released
277
October, 2019
275
August, 2017
234
August, 2021
214
June, 2019
201
May, 2021
174
May, 2022
165
February, 2021
162
November, 2017
151
May, 2020
115
May, 2019
112
February, 2023
74
April, 2019
64
July, 2019
59
October, 2018
52
December, 2017
49
March, 2020
48
July, 2018
47
September, 2018
47
September, 2023
43
April, 2018
43
September, 2020
40
November, 2019
24
February, 2018
24
November, 2018
23
October, 2017
19
April, 2020
16
January, 2021
14
May, 2023
12
November, 2020
11
January, 2019
11
September, 2017
8
January, 2018
7
August, 2020
7
December, 2018
5
December, 2019
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
129
bed narrowPeak
124
bigWig
100
bam
86
tagAlign
Organism
201
Homo sapiens
Biosample type
151
primary cell
32
in vitro differentiated cells
17
cell line
1
tissue
Organ
19
epithelium
19
pancreas
1
bone element
1
bone marrow
1
connective tissue
1
thymus
Project
102
T1D
99
AMP
Genome assembly (visualization)
137
hg19
99
GRCh38
Lab
164
Kyle Gaulton, UCSD
37
AMP-T2D consortium
Audit category:
18
inconsistent ontology term
target.investigated_as!
transcription factor
assay_title!
total RNA-seq
BIOSAMPLE
ASSAY
201 results
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Clear Filters
ChIP-seq
ATAC-seq
pCHi-C
DNAme array
primary cell
monocyte
85
13
1
1
CD8-positive, alpha-beta T cell
33
1
naive thymus-derived CD4-positive, alpha-beta T cell
2
1
CD4-positive, alpha-beta T cell
2
neutrophil
1
1
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in vitro differentiated cells
embryonic stem cell
25
5
pancreatic PP cell
2
cell line
EndoC_BH1
1
16
tissue
thymus
1
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