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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
26
ATAC-seq
12
ChIP-seq
2
Hi-C
Assay category
26
DNA accessibility
Transcription
12
DNA binding
2
3D chromatin structure
Target of assay
10
histone
10
histone modification
6
broad histone mark
4
narrow histone mark
2
control
1
RNA binding protein
transcription factor
Date released
277
October, 2019
275
August, 2017
214
June, 2019
201
May, 2021
162
November, 2017
151
May, 2020
147
February, 2021
140
May, 2022
128
August, 2021
115
May, 2019
111
February, 2023
74
April, 2019
59
October, 2018
52
December, 2017
49
March, 2020
46
September, 2018
43
July, 2019
40
November, 2019
35
May, 2024
24
February, 2018
23
November, 2018
23
October, 2017
16
January, 2021
12
November, 2020
11
January, 2019
11
May, 2023
11
September, 2017
10
April, 2020
8
January, 2018
7
August, 2020
7
December, 2018
5
March, 2019
4
October, 2022
3
September, 2020
2
December, 2019
1
August, 2018
1
August, 2022
1
March, 2023
Available data
38
bam
36
bed narrowPeak
10
bigWig
2
bedpe bed3+
2
hic
Organism
40
Homo sapiens
Biosample type
21
tissue
14
cell line
5
in vitro differentiated cells
Organ
34
pancreas
14
epithelium
1
adipose tissue
1
connective tissue
Project
40
AMP
Genome assembly (visualization)
38
hg19
36
GRCh38
Lab
40
AMP-T2D consortium
Audit category:
20
inconsistent ontology term
target.investigated_as!
transcription factor
assay_slims!
Transcription
BIOSAMPLE
ASSAY
40 results
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Clear Filters
ATAC-seq
ChIP-seq
Hi-C
tissue
islet of Langerhans
19
1
adipose tissue(adipose white tissue)
1
cell line
EndoC_BH1
1
12
1
in vitro differentiated cells
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
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