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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
26
ATAC-seq
12
ChIP-seq
2
Hi-C
Assay category
26
DNA accessibility
12
DNA binding
2
3D chromatin structure
Target of assay
10
histone
10
histone modification
6
broad histone mark
4
narrow histone mark
2
control
1
RNA binding protein
transcription factor
Date released
291
October, 2019
275
August, 2017
214
June, 2019
210
May, 2021
200
May, 2022
189
February, 2023
185
August, 2021
162
November, 2017
152
May, 2020
151
February, 2021
115
May, 2019
74
April, 2019
59
October, 2018
59
September, 2020
52
December, 2017
47
September, 2018
47
September, 2023
43
July, 2019
40
November, 2019
35
May, 2024
24
February, 2018
24
November, 2018
23
October, 2017
19
April, 2020
19
March, 2020
16
January, 2021
15
May, 2023
12
November, 2020
11
January, 2019
11
September, 2017
8
January, 2018
7
August, 2020
7
December, 2018
5
March, 2019
5
March, 2023
4
July, 2018
4
October, 2022
1
August, 2018
1
August, 2022
1
December, 2019
Available data
58
bam
36
bed narrowPeak
30
bigWig
tsv
2
bedpe bed3+
2
hic
Organism
40
Homo sapiens
Biosample type
21
tissue
14
cell line
5
in vitro differentiated cells
Organ
34
pancreas
14
epithelium
1
adipose tissue
1
connective tissue
Project
40
AMP
Genome assembly (visualization)
38
hg19
36
GRCh38
Lab
40
AMP-T2D consortium
Audit category:
20
inconsistent ontology term
target.investigated_as!
transcription factor
files.file_type!
tsv
BIOSAMPLE
ASSAY
40 results
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Clear Filters
ATAC-seq
ChIP-seq
Hi-C
tissue
islet of Langerhans
19
1
adipose tissue(adipose white tissue)
1
cell line
EndoC_BH1
1
12
1
in vitro differentiated cells
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
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