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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
26
ATAC-seq
20
total RNA-seq
12
ChIP-seq
Hi-C
1
CRISPR RNA-seq
1
CRISPRi RNA-seq
1
shRNA RNA-seq
1
siRNA RNA-seq
Assay category
26
DNA accessibility
24
Transcription
12
DNA binding
Target of assay
10
histone
10
histone modification
6
broad histone mark
4
narrow histone mark
2
control
1
RNA binding protein
transcription factor
Date released
710
February, 2021
383
May, 2021
364
August, 2017
341
May, 2020
305
August, 2021
302
October, 2019
214
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
162
November, 2017
115
May, 2019
100
July, 2019
74
April, 2019
73
September, 2018
61
October, 2018
59
September, 2020
58
November, 2019
54
March, 2020
52
December, 2017
49
April, 2018
47
September, 2023
39
February, 2018
35
May, 2024
25
February, 2020
24
November, 2018
23
October, 2017
19
April, 2020
16
January, 2019
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
6
December, 2018
4
August, 2018
4
March, 2019
4
March, 2023
3
June, 2018
1
August, 2022
1
October, 2022
Available data
58
bam
36
bed narrowPeak
30
bigWig
20
tsv
Organism
58
Homo sapiens
Biosample type
39
tissue
16
cell line
5
in vitro differentiated cells
2
stem cell
Organ
52
pancreas
14
epithelium
1
adipose tissue
1
connective tissue
Project
58
AMP
4
community
Genome assembly (visualization)
56
GRCh38
56
hg19
Lab
58
AMP-T2D consortium
4
Anna Gloyn, Oxford
Audit category:
20
inconsistent ontology term
target.investigated_as!
transcription factor
assay_title!
Hi-C
BIOSAMPLE
ASSAY
62 results
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Clear Filters
ATAC-seq
total RNA-seq
ChIP-seq
CRISPR RNA-seq
CRISPRi RNA-seq
shRNA RNA-seq
siRNA RNA-seq
tissue
islet of Langerhans
19
19
adipose tissue(adipose white tissue)
1
cell line
EndoC_BH1
1
1
12
EndoC-BH1
1
1
in vitro differentiated cells
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
stem cell
SB Ad3.1
1
1
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