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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
26
ATAC-seq
20
total RNA-seq
2
ChIP-seq
2
Hi-C
Assay category
26
DNA accessibility
20
Transcription
2
3D chromatin structure
2
DNA binding
Target of assay
histone
10
histone modification
6
broad histone mark
narrow histone mark
2
control
1
RNA binding protein
transcription factor
Date released
710
February, 2021
314
May, 2020
288
August, 2021
243
May, 2021
205
February, 2023
200
May, 2022
195
June, 2019
168
July, 2018
166
August, 2017
111
October, 2019
108
July, 2019
74
November, 2017
61
March, 2020
59
September, 2020
50
November, 2019
49
April, 2018
47
September, 2023
41
September, 2018
31
October, 2018
25
February, 2020
24
November, 2018
23
February, 2018
23
May, 2019
21
December, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
14
April, 2019
11
October, 2017
11
September, 2017
10
December, 2019
9
January, 2019
8
January, 2018
7
August, 2020
7
December, 2018
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
48
bam
26
bed narrowPeak
20
bigWig
20
tsv
2
bedpe bed3+
2
hic
Organism
50
Homo sapiens
Biosample type
40
tissue
5
cell line
5
in vitro differentiated cells
Organ
44
pancreas
5
epithelium
1
adipose tissue
1
connective tissue
Project
50
AMP
Genome assembly (visualization)
48
hg19
46
GRCh38
Lab
50
AMP-T2D consortium
Audit category:
11
inconsistent ontology term
target.investigated_as!
transcription factor
narrow histone mark
histone
BIOSAMPLE
ASSAY
50 results
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Clear Filters
ATAC-seq
total RNA-seq
ChIP-seq
Hi-C
tissue
islet of Langerhans
19
19
1
adipose tissue(adipose white tissue)
1
cell line
EndoC_BH1
1
1
2
1
in vitro differentiated cells
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
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