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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
247
ChIP-seq
50
total RNA-seq
48
ATAC-seq
10
DNase-seq
7
Hi-C
4
pCHi-C
1
FAIRE-seq
Assay category
247
DNA binding
Target of assay
206
histone
206
histone modification
145
narrow histone mark
61
broad histone mark
41
control
transcription factor
7
recombinant protein
1
RNA binding protein
Date released
249
August, 2017
235
October, 2019
162
November, 2017
149
May, 2021
115
May, 2019
74
April, 2019
59
October, 2018
52
December, 2017
50
May, 2020
35
May, 2024
32
August, 2021
32
September, 2018
27
June, 2019
24
February, 2018
15
October, 2017
12
November, 2019
11
January, 2019
6
December, 2018
6
November, 2018
6
September, 2017
3
February, 2021
3
March, 2020
Available data
224
bam
179
bigWig
177
bed narrowPeak
58
bigBed narrowPeak
49
tagAlign
2
bed broadPeak
2
bigBed broadPeak
1
tagAlign bed3+
Organism
247
Homo sapiens
Biosample type
195
tissue
28
cell line
24
primary cell
Organ
84
brain
59
limb
40
blood vessel
40
vasculature
36
epithelium
35
nerve
25
pancreas
23
artery
17
vein
14
kidney
5
heart
5
liver
4
gonad
4
ovary
2
eye
1
connective tissue
1
lymph node
1
pituitary gland
Project
247
AMP
Genome assembly (visualization)
181
hg19
179
GRCh38
Lab
247
AMP-T2D consortium
Audit category:
17
inconsistent ontology term
target.investigated_as!
transcription factor
BIOSAMPLE
ASSAY
247 results
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Clear Filters
ChIP-seq
tissue
tibial nerve
35
tibial artery
23
islet of Langerhans
21
brain
5
heart
5
+ See 77 more…
cell line
Panc1
13
EndoC_BH1
12
RCC 7860 HIF1a re-expression
1
RCC 7860 HIF2a over-expression
1
RCC 7860 vector
1
primary cell
endothelial cell of umbilical vein
17
epithelial cell of proximal tubule
7
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