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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
80
ChIP-seq
40
single cell RNA-seq
16
total RNA-seq
8
ATAC-seq
Assay category
80
DNA binding
56
Transcription
8
DNA accessibility
Target of assay
60
histone
60
histone modification
37
broad histone mark
23
narrow histone mark
20
control
transcription factor
4
RNA binding protein
Date released
710
February, 2021
383
May, 2021
364
August, 2017
341
May, 2020
308
August, 2021
307
October, 2019
214
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
162
November, 2017
115
May, 2019
108
July, 2019
74
April, 2019
73
September, 2018
64
March, 2020
61
October, 2018
60
November, 2019
59
September, 2020
52
December, 2017
49
April, 2018
47
September, 2023
39
February, 2018
35
May, 2024
25
February, 2020
24
November, 2018
23
October, 2017
19
April, 2020
16
January, 2019
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
7
December, 2018
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
84
bam
68
bigWig
65
bed narrowPeak
64
bigBed narrowPeak
52
fastq
19
zippedFastqFolder
2
bed bed3+
Organism
144
Homo sapiens
Biosample type
80
tissue
64
primary cell
Organ
52
heart
30
pancreas
24
epithelium
22
kidney
Project
85
AMP
59
HPAP
Genome assembly (visualization)
69
GRCh38
67
hg19
Lab
85
AMP-T2D consortium
59
Klaus Kaestner, Upenn
target.investigated_as!
transcription factor
BIOSAMPLE
ASSAY
144 results
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Clear Filters
ChIP-seq
single cell RNA-seq
total RNA-seq
ATAC-seq
tissue
heart left ventricle
30
kidney
22
heart right ventricle
13
heart
9
islet of Langerhans
6
primary cell
Langerhans cell
40
pancreatic alpha cell
15
4
pancreatic beta cell
1
3
pancreatic acinar cell
1
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