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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
54
total RNA-seq
20
ChIP-seq
10
ATAC-seq
4
DNase-seq
Assay category
54
Transcription
20
DNA binding
14
DNA accessibility
Target of assay
20
histone
20
histone modification
14
broad histone mark
6
narrow histone mark
transcription factor
1
RNA binding protein
Date released
60
February, 2021
21
October, 2019
3
July, 2019
2
June, 2019
2
May, 2019
Available data
88
bam
80
bigWig
54
tsv
34
bed narrowPeak
24
bigBed narrowPeak
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
Organism
88
Homo sapiens
Biosample type
60
cell line
26
tissue
2
primary cell
Organ
639
pancreas
549
connective tissue
409
adipose tissue
302
epithelium
296
liver
176
heart
161
brain
156
vasculature
151
blood vessel
120
kidney
96
limb
88
artery
73
musculature of body
70
bone element
33
eye
31
nerve
26
embryo
18
ureter
17
vein
12
skeleton
8
spleen
4
blood
4
bodily fluid
2
pericardium
1
pituitary gland
Project
88
AMP
Genome assembly (visualization)
123
GRCh38
88
hg19
Lab
88
AMP-T2D consortium
target.investigated_as!
transcription factor
BIOSAMPLE
ASSAY
88 results
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total RNA-seq
ChIP-seq
ATAC-seq
DNase-seq
cell line
smooth muscle cell of the coronary artery
52
8
tissue
tibial artery
18
1
2
coronary artery
2
1
2
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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