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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
65
ChIP-seq
46
ATAC-seq
9
DNase-seq
1
FAIRE-seq
Assay category
65
DNA binding
56
DNA accessibility
Target of assay
65
histone
65
histone modification
41
broad histone mark
24
narrow histone mark
transcription factor
4
RNA binding protein
Date released
36
May, 2019
35
February, 2023
34
October, 2019
8
February, 2021
5
June, 2019
2
July, 2019
1
November, 2017
Available data
172
bam
142
bigWig
121
bed narrowPeak
75
bigBed narrowPeak
68
tsv
12
bed broadPeak
12
bigBed broadPeak
11
bed bed3+
3
hic
2
bedpe bed3+
2
fastq
2
hdf5
2
tagAlign
1
bed bedMethyl
1
bigBed bedMethyl
1
tar
Organism
121
Homo sapiens
Biosample type
97
tissue
16
primary cell
8
cell line
Organ
201
pancreas
200
brain
174
heart
174
kidney
142
epithelium
124
vasculature
121
blood vessel
112
liver
92
limb
69
artery
60
musculature of body
52
connective tissue
32
eye
27
nerve
18
ureter
13
vein
11
embryo
8
adipose tissue
8
bone element
8
skeleton
8
spleen
3
blood
3
bodily fluid
1
pituitary gland
Project
121
AMP
Genome assembly (visualization)
120
GRCh38
85
hg19
Lab
121
AMP-T2D consortium
target.investigated_as!
transcription factor
organ_slims!
lung
BIOSAMPLE
ASSAY
121 results
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Clear Filters
ChIP-seq
ATAC-seq
DNase-seq
FAIRE-seq
tissue
coronary artery
2
36
2
tibial artery
18
1
2
ascending aorta
12
1
thoracic aorta
11
1
aorta
11
primary cell
endothelial cell of umbilical vein
10
2
1
brain microvascular endothelial cell
1
1
kidney capillary endothelial cell
1
cell line
smooth muscle cell of the coronary artery
8
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