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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
4
ATAC-seq
2
Capture-C
2
DNase-seq
1
ChIP-seq
Assay category
6
DNA accessibility
1
DNA binding
Target of assay
transcription factor
1
control
Date released
4
February, 2023
2
August, 2021
1
August, 2017
1
June, 2019
1
November, 2018
Available data
518
bam
499
bigWig
463
tsv
59
fastq
36
bed narrowPeak
22
tagAlign
9
bed bed3+
8
bigBed narrowPeak
5
bed bed3
4
bed bedgraph
4
bed broadPeak
3
bigBed broadPeak
2
bed bedMethyl
2
bigBed bedMethyl
1
bedpe bed3+
Organism
9
Homo sapiens
Biosample type
primary cell
7
in vitro differentiated cells
2
tissue
Organ
68
kidney
36
limb
33
musculature of body
27
brain
27
heart
22
pancreas
18
ureter
9
connective tissue
5
blood vessel
5
liver
5
vasculature
4
artery
3
embryo
3
eye
2
adipose tissue
2
nerve
1
spleen
Project
9
AMP
Genome assembly (visualization)
9
hg19
3
GRCh38
Lab
7
AMP-T2D consortium
2
Struan F.A. Grant, CHOP
Audit category:
2
inconsistent ontology term
target.investigated_as!
transcription factor
biosample_type!
primary cell
BIOSAMPLE
ASSAY
9 results
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ATAC-seq
Capture-C
DNase-seq
ChIP-seq
in vitro differentiated cells
adipocyte
1
1
1
immature adipocyte
2
osteoblast
1
preadipocyte
1
tissue
omental fat pad
2
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