Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
61
ChIP-seq
Assay category
61
DNA binding
Target of assay
317
transcription factor
89
recombinant protein
83
control
61
RNA binding protein
26
chromatin remodeller
24
histone
24
histone modification
13
narrow histone mark
11
broad histone mark
3
nucleotide modification
1
other context
1
other post-translational modification
Date released
30
November, 2017
21
November, 2018
6
January, 2019
2
December, 2018
1
August, 2021
1
November, 2019
Available data
64
bam
63
bed narrowPeak
63
bigWig
63
fastq
61
bigBed narrowPeak
4
bed broadPeak
bigBed broadPeak
1
tar
Organism
61
Homo sapiens
Biosample type
61
cell line
23
tissue
11
in vitro differentiated cells
5
primary cell
Organ
50
liver
10
blood
10
bodily fluid
1
epithelium
1
pancreas
Project
61
AMP
Genome assembly (visualization)
58
hg19
55
GRCh38
Lab
60
AMP-T2D consortium
1
Bing Ren, UCSD
Audit category:
1
inconsistent ontology term
Audit category:
2
missing controlled_by
Audit category:
4
inconsistent control read length
3
inconsistent control run_type
files.file_type!
bigBed broadPeak
BIOSAMPLE
ASSAY
61 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
cell line
HepG2
50
GM12878
10
EndoC_BH1
1
See all biosamples
Download