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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
31
ChIP-seq
Assay category
31
DNA binding
Target of assay
120
transcription factor
31
RNA binding protein
27
control
23
histone
23
histone modification
23
recombinant protein
15
chromatin remodeller
12
narrow histone mark
11
broad histone mark
3
nucleotide modification
Date released
November, 2017
21
November, 2018
6
January, 2019
2
December, 2018
1
August, 2021
1
November, 2019
Available data
31
bed narrowPeak
31
bigWig
30
bam
29
bigBed narrowPeak
29
fastq
Organism
31
Homo sapiens
Biosample type
31
cell line
23
tissue
11
in vitro differentiated cells
7
primary cell
Organ
20
liver
10
blood
10
bodily fluid
1
epithelium
1
pancreas
Project
31
AMP
Genome assembly (visualization)
31
hg19
30
GRCh38
Lab
30
AMP-T2D consortium
1
Bing Ren, UCSD
Audit category:
1
inconsistent ontology term
Audit category:
1
inconsistent control read length
1
inconsistent control run_type
month_released!
November, 2017
BIOSAMPLE
ASSAY
31 results
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ChIP-seq
cell line
HepG2
20
GM12878
10
EndoC_BH1
1
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