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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
ChIP-seq
Assay category
15
DNA binding
Target of assay
541
histone modification
540
histone
343
control
323
narrow histone mark
216
broad histone mark
80
transcription factor
15
RNA binding protein
7
recombinant protein
5
nucleotide modification
2
chromatin remodeller
Date released
5
August, 2017
5
May, 2021
2
November, 2017
1
April, 2019
1
August, 2021
1
November, 2019
Available data
100
bam
98
bed narrowPeak
98
bigWig
bigBed narrowPeak
86
fastq
9
bed broadPeak
9
bigBed broadPeak
1
bed bed3+
1
tar
Organism
15
Homo sapiens
Biosample type
9
in vitro differentiated cells
4
cell line
2
tissue
Organ
4
connective tissue
3
liver
2
pancreas
1
epithelium
1
kidney
Project
15
AMP
Genome assembly (visualization)
7
hg19
6
GRCh38
Lab
9
AMP-T2D consortium
5
Kyle Gaulton, UCSD
1
Bing Ren, UCSD
Audit category:
1
inconsistent ontology term
Audit category:
missing controlled_by
audit.NOT_COMPLIANT.category!
missing controlled_by
files.file_type!
bigBed narrowPeak
BIOSAMPLE
ASSAY
15 results
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Clear Filters
ChIP-seq
in vitro differentiated cells
embryonic stem cell
5
adipocyte
4
cell line
HepG2
3
EndoC_BH1
1
tissue
islet of Langerhans
1
kidney
1
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