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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
7
ChIP-seq
Assay category
7
DNA binding
Target of assay
54
histone
54
histone modification
47
transcription factor
30
broad histone mark
24
narrow histone mark
7
RNA binding protein
4
chromatin remodeller
1
other context
1
other post-translational modification
Date released
5
November, 2017
2
August, 2017
Available data
97
bam
95
bigWig
94
bed narrowPeak
87
bigBed narrowPeak
83
fastq
7
bed broadPeak
7
bigBed broadPeak
2
bed bed3+
1
tar
Organism
7
Homo sapiens
Biosample type
5
primary cell
2
cell line
Organ
3
brain
2
epithelium
2
liver
2
vasculature
1
blood vessel
Project
7
AMP
Genome assembly (visualization)
7
hg19
5
GRCh38
Lab
7
AMP-T2D consortium
Audit category:
inconsistent control read length
audit.WARNING.category!
inconsistent control read length
BIOSAMPLE
ASSAY
7 results
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ChIP-seq
primary cell
skeletal muscle myoblast
2
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
cell line
HepG2
2
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