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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
73
ChIP-seq
Assay category
73
DNA binding
Target of assay
695
histone modification
694
histone
364
narrow histone mark
329
broad histone mark
263
transcription factor
240
control
70
RNA binding protein
23
recombinant protein
20
chromatin remodeller
5
nucleotide modification
3
other context
3
other post-translational modification
Date released
November, 2017
24
November, 2018
11
October, 2018
6
August, 2017
6
January, 2019
5
May, 2021
5
May, 2024
4
April, 2019
4
December, 2017
4
May, 2019
2
December, 2018
1
August, 2021
1
November, 2019
Available data
67
bigWig
66
bed narrowPeak
62
bam
54
bigBed narrowPeak
53
fastq
2
bed bed3+
Organism
73
Homo sapiens
Biosample type
31
cell line
31
tissue
11
in vitro differentiated cells
primary cell
Organ
24
liver
10
blood
10
bodily fluid
10
heart
9
connective tissue
9
pancreas
5
adipose tissue
3
blood vessel
3
epithelium
3
spleen
3
vasculature
1
artery
1
kidney
Project
73
AMP
Genome assembly (visualization)
66
GRCh38
62
hg19
Lab
62
AMP-T2D consortium
5
Kyle Gaulton, UCSD
5
Patrick T. Ellinor, Broad
1
Bing Ren, UCSD
Audit category:
1
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
1
inconsistent control read length
1
inconsistent control run_type
biosample_type!
primary cell
month_released!
November, 2017
BIOSAMPLE
ASSAY
73 results
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Clear Filters
ChIP-seq
cell line
HepG2
20
GM12878
10
EndoC_BH1
1
tissue
body of pancreas
5
left cardiac atrium
5
heart left ventricle
3
omental fat pad
3
spleen
3
+ See 10 more…
in vitro differentiated cells
embryonic stem cell
5
adipocyte
4
hepatocyte
2
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