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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
30
ChIP-seq
Assay category
30
DNA binding
Target of assay
356
histone
356
histone modification
181
broad histone mark
174
narrow histone mark
121
transcription factor
94
control
30
RNA binding protein
13
chromatin remodeller
7
recombinant protein
3
nucleotide modification
Date released
6
August, 2017
6
January, 2019
5
May, 2021
4
June, 2019
3
November, 2017
2
December, 2018
2
November, 2018
1
May, 2019
1
November, 2019
Available data
25
bam
25
bed narrowPeak
25
bigWig
20
bigBed narrowPeak
19
fastq
5
bed broadPeak
5
bigBed broadPeak
Organism
30
Homo sapiens
Biosample type
tissue
11
cell line
10
primary cell
9
in vitro differentiated cells
Organ
liver
10
blood
10
bodily fluid
8
epithelium
5
connective tissue
3
brain
2
kidney
2
vasculature
1
blood vessel
1
eye
1
heart
1
pancreas
Project
30
AMP
Genome assembly (visualization)
25
hg19
24
GRCh38
Lab
25
AMP-T2D consortium
5
Kyle Gaulton, UCSD
Audit category:
4
inconsistent ontology term
biosample_type!
tissue
organ_slims!
liver
BIOSAMPLE
ASSAY
30 results
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ChIP-seq
cell line
GM12878
10
EndoC_BH1
1
primary cell
skeletal muscle myoblast
2
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
cardiac fibroblast
1
cardiac muscle cell
1
+ See 4 more…
in vitro differentiated cells
embryonic stem cell
5
adipocyte
4
See all biosamples
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