Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
76
ChIP-seq
Assay category
76
DNA binding
Target of assay
410
transcription factor
150
histone
150
histone modification
120
control
89
recombinant protein
76
RNA binding protein
75
broad histone mark
74
narrow histone mark
33
chromatin remodeller
3
nucleotide modification
2
other context
2
other post-translational modification
Date released
34
November, 2017
21
November, 2018
6
January, 2019
5
May, 2021
4
August, 2017
2
December, 2017
2
December, 2018
1
August, 2021
1
November, 2019
Available data
70
bam
69
bed narrowPeak
69
bigWig
69
fastq
63
bigBed narrowPeak
4
bed broadPeak
4
bigBed broadPeak
1
tar
Organism
76
Homo sapiens
Biosample type
65
cell line
23
tissue
11
in vitro differentiated cells
10
primary cell
Organ
56
liver
10
blood
10
bodily fluid
4
connective tissue
3
epithelium
1
pancreas
Project
76
AMP
Genome assembly (visualization)
68
hg19
64
GRCh38
Lab
70
AMP-T2D consortium
5
Kyle Gaulton, UCSD
1
Bing Ren, UCSD
Audit category:
1
inconsistent ontology term
Audit category:
2
missing controlled_by
Audit category:
6
inconsistent control read length
3
inconsistent control run_type
BIOSAMPLE
ASSAY
76 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
cell line
HepG2
54
GM12878
10
EndoC_BH1
1
in vitro differentiated cells
embryonic stem cell
5
adipocyte
4
hepatocyte
2
See all biosamples
Download