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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
ChIP-seq
Assay category
10
DNA binding
Target of assay
422
histone
422
histone modification
293
control
274
narrow histone mark
148
broad histone mark
59
transcription factor
10
RNA binding protein
8
recombinant protein
5
nucleotide modification
Date released
August, 2017
5
May, 2021
2
November, 2017
1
April, 2019
1
August, 2021
1
November, 2019
Available data
95
bam
93
bed narrowPeak
93
bigWig
bigBed narrowPeak
81
fastq
7
bed broadPeak
7
bigBed broadPeak
1
tar
Organism
10
Homo sapiens
Biosample type
5
in vitro differentiated cells
4
cell line
1
tissue
Organ
3
liver
1
epithelium
1
kidney
1
pancreas
Project
10
AMP
Genome assembly (visualization)
2
hg19
1
GRCh38
Lab
5
Kyle Gaulton, UCSD
4
AMP-T2D consortium
1
Bing Ren, UCSD
Audit category:
1
inconsistent ontology term
files.file_type!
bigBed narrowPeak
month_released!
August, 2017
BIOSAMPLE
ASSAY
10 results
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Clear Filters
ChIP-seq
in vitro differentiated cells
embryonic stem cell
5
cell line
HepG2
3
EndoC_BH1
1
tissue
kidney
1
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