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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
14
ChIP-seq
Assay category
14
DNA binding
Target of assay
615
histone
615
histone modification
327
narrow histone mark
288
broad histone mark
158
control
32
transcription factor
14
RNA binding protein
7
recombinant protein
Date released
5
May, 2019
4
April, 2019
4
June, 2019
1
November, 2019
Available data
103
bam
100
bigWig
99
bed narrowPeak
93
bigBed narrowPeak
fastq
9
bed broadPeak
9
bigBed broadPeak
2
bed bed3+
1
tar
Organism
14
Homo sapiens
Biosample type
8
tissue
5
primary cell
1
cell line
Organ
6
heart
4
epithelium
3
blood vessel
3
kidney
3
vasculature
1
artery
1
connective tissue
1
eye
1
pancreas
Project
14
AMP
Genome assembly (visualization)
13
GRCh38
13
hg19
Lab
14
AMP-T2D consortium
5
Kyle Gaulton, UCSD
1
Bing Ren, UCSD
Audit category:
4
inconsistent ontology term
files.file_type!
fastq
BIOSAMPLE
ASSAY
14 results
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ChIP-seq
tissue
heart left ventricle
3
ascending aorta
1
coronary artery
1
kidney
1
right atrium auricular region
1
+ See 1 more…
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
epithelial cell of proximal tubule
1
kidney epithelial cell
1
retinal pigment epithelial cell
1
cell line
EndoC_BH1
1
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