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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
14
ChIP-seq
Assay category
14
DNA binding
Target of assay
690
histone
690
histone modification
364
narrow histone mark
326
broad histone mark
155
control
43
transcription factor
14
RNA binding protein
7
recombinant protein
5
nucleotide modification
Date released
5
May, 2021
3
June, 2019
3
May, 2019
1
April, 2019
1
August, 2021
1
November, 2019
Available data
97
bam
95
bigWig
94
bed narrowPeak
fastq
87
bigBed narrowPeak
9
bed broadPeak
9
bigBed broadPeak
2
bed bed3+
1
tar
Organism
14
Homo sapiens
Biosample type
5
in vitro differentiated cells
4
primary cell
3
tissue
2
cell line
Organ
heart
4
epithelium
3
blood vessel
3
kidney
3
vasculature
1
artery
1
connective tissue
1
eye
1
liver
1
pancreas
Project
14
AMP
Genome assembly (visualization)
8
hg19
7
GRCh38
Lab
8
AMP-T2D consortium
5
Kyle Gaulton, UCSD
1
Bing Ren, UCSD
Audit category:
3
inconsistent ontology term
files.file_type!
fastq
organ_slims!
heart
BIOSAMPLE
ASSAY
14 results
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Clear Filters
ChIP-seq
in vitro differentiated cells
embryonic stem cell
5
primary cell
cardiac muscle cell
1
epithelial cell of proximal tubule
1
kidney epithelial cell
1
retinal pigment epithelial cell
1
tissue
ascending aorta
1
kidney
1
thoracic aorta
1
cell line
EndoC_BH1
1
HepG2
1
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