Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
81
ChIP-seq
Assay category
81
DNA binding
Target of assay
414
transcription factor
152
control
147
histone modification
146
histone
81
RNA binding protein
81
broad histone mark
81
recombinant protein
64
narrow histone mark
29
chromatin remodeller
5
other context
5
other post-translational modification
Date released
32
November, 2017
21
November, 2018
11
October, 2018
6
January, 2019
5
August, 2017
4
December, 2017
2
December, 2018
Available data
93
bed narrowPeak
93
bigWig
90
bam
81
bigBed narrowPeak
81
fastq
4
bed broadPeak
4
bigBed broadPeak
1
bed bed3+
1
tar
Organism
81
Homo sapiens
Biosample type
61
cell line
14
tissue
6
in vitro differentiated cells
primary cell
Organ
55
liver
10
blood
10
bodily fluid
9
connective tissue
7
pancreas
5
adipose tissue
2
epithelium
Project
81
AMP
Genome assembly (visualization)
78
hg19
76
GRCh38
Lab
81
AMP-T2D consortium
Audit category:
missing controlled_by
Audit category:
4
inconsistent control read length
1
inconsistent control run_type
audit.NOT_COMPLIANT.category!
missing controlled_by
biosample_type!
primary cell
BIOSAMPLE
ASSAY
81 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
cell line
HepG2
51
GM12878
10
tissue
body of pancreas
5
omental fat pad
3
subcutaneous adipose tissue
2
islet of Langerhans
1
liver
1
+ See 2 more…
in vitro differentiated cells
adipocyte
4
hepatocyte
2
See all biosamples
Download