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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
615
ChIP-seq
Assay category
615
DNA binding
Target of assay
593
histone modification
592
histone
309
narrow histone mark
283
broad histone mark
187
control
89
transcription factor
23
RNA binding protein
3
other context
3
other post-translational modification
2
chromatin remodeller
2
nucleotide modification
Date released
168
October, 2019
125
August, 2017
93
May, 2019
70
November, 2017
64
April, 2019
41
October, 2018
27
May, 2020
12
October, 2017
7
December, 2017
6
January, 2019
2
March, 2020
Available data
508
bigWig
505
bed narrowPeak
488
bam
332
bigBed narrowPeak
186
tagAlign
88
fastq
35
bed broadPeak
14
bed bed3+
1
tagAlign bed3+
Organism
609
Homo sapiens
Biosample type
615
tissue
247
primary cell
123
in vitro differentiated cells
103
cell line
2
stem cell
Organ
184
brain
81
pancreas
71
liver
65
heart
57
blood vessel
57
vasculature
49
limb
38
connective tissue
37
adipose tissue
25
musculature of body
24
nerve
21
artery
21
kidney
6
spleen
4
gonad
4
ovary
2
eye
1
lymph node
1
pituitary gland
Project
613
AMP
2
T1D
Genome assembly (visualization)
480
GRCh38
459
hg19
Lab
615
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
9
missing controlled_by
Audit category:
6
inconsistent control read length
1
inconsistent assembly
BIOSAMPLE
ASSAY
615 results
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ChIP-seq
tissue
liver
65
islet of Langerhans
53
subcutaneous abdominal adipose tissue
31
heart left ventricle
27
tibial nerve
24
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