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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
6
ChIP-seq
5
MeRIP-seq
Assay category
6
DNA binding
Target of assay
197
histone
197
histone modification
103
broad histone mark
94
narrow histone mark
37
control
24
transcription factor
6
RNA binding protein
5
nucleotide modification
Date released
5
May, 2021
5
November, 2020
1
August, 2021
Available data
bam
101
bigWig
100
bed narrowPeak
93
bigBed narrowPeak
89
fastq
9
bed broadPeak
9
bigBed broadPeak
2
bed bed3+
1
tar
Organism
11
Homo sapiens
Biosample type
5
in vitro differentiated cells
4
cell line
2
tissue
Organ
5
pancreas
3
epithelium
1
liver
Project
11
AMP
Genome assembly (visualization)
1
hg19
Lab
5
Kyle Gaulton, UCSD
5
Rohit N. Kulkarni, M.D., Ph.D.
1
Bing Ren, UCSD
Audit category:
3
inconsistent ontology term
files.file_type!
bam
BIOSAMPLE
ASSAY
11 results
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ChIP-seq
MeRIP-seq
in vitro differentiated cells
embryonic stem cell
5
cell line
EndoC_BH1
3
HepG2
1
tissue
islet of Langerhans
2
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