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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
9
ChIP-seq
5
MeRIP-seq
Assay category
9
DNA binding
Target of assay
151
histone
151
histone modification
78
broad histone mark
73
narrow histone mark
53
control
19
transcription factor
9
RNA binding protein
5
nucleotide modification
Date released
6
October, 2018
5
November, 2020
2
August, 2017
1
November, 2019
Available data
9
bam
9
bigWig
8
bed narrowPeak
8
fastq
6
bigBed narrowPeak
2
bed bed3+
Organism
14
Homo sapiens
Biosample type
10
tissue
4
cell line
Organ
58
liver
14
pancreas
11
epithelium
11
heart
10
blood
10
bodily fluid
10
connective tissue
5
adipose tissue
5
vasculature
4
blood vessel
3
brain
3
kidney
1
artery
1
eye
Project
14
AMP
Genome assembly (visualization)
9
GRCh38
9
hg19
Lab
9
AMP-T2D consortium
5
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
4
inconsistent ontology term
Audit category:
1
missing controlled_by
BIOSAMPLE
ASSAY
14 results
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ChIP-seq
MeRIP-seq
tissue
body of pancreas
5
islet of Langerhans
2
2
pancreas
1
cell line
EndoC_BH1
1
3
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