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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
8
ChIP-seq
5
MeRIP-seq
Assay category
8
DNA binding
Target of assay
320
control
148
histone
148
histone modification
74
broad histone mark
74
narrow histone mark
18
transcription factor
8
RNA binding protein
5
nucleotide modification
1
recombinant protein
Date released
5
May, 2021
5
November, 2020
2
November, 2017
1
April, 2019
Available data
89
bam
bigWig
86
bed narrowPeak
79
bigBed narrowPeak
75
fastq
7
bed broadPeak
7
bigBed broadPeak
2
bed bed3+
1
tar
Organism
13
Homo sapiens
Biosample type
5
cell line
5
in vitro differentiated cells
3
tissue
Organ
5
pancreas
3
epithelium
2
liver
1
kidney
Project
13
AMP
Lab
5
Kyle Gaulton, UCSD
5
Rohit N. Kulkarni, M.D., Ph.D.
3
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
target.investigated_as!
chromatin remodeller
files.file_type!
bigWig
BIOSAMPLE
ASSAY
13 results
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Clear Filters
ChIP-seq
MeRIP-seq
cell line
EndoC_BH1
3
HepG2
2
in vitro differentiated cells
embryonic stem cell
5
tissue
islet of Langerhans
2
kidney
1
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