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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
45
ChIP-seq
Assay category
45
DNA binding
Target of assay
88
histone
88
histone modification
45
broad histone mark
42
narrow histone mark
38
transcription factor
29
control
9
RNA binding protein
2
chromatin remodeller
Date released
20
August, 2017
December, 2017
10
May, 2021
8
February, 2018
7
August, 2021
Available data
26
bam
26
bed narrowPeak
26
bigWig
20
fastq
14
tagAlign
Organism
45
Homo sapiens
Biosample type
280
tissue
122
primary cell
45
in vitro differentiated cells
19
cell line
Organ
20
connective tissue
3
embryo
Project
45
AMP
Genome assembly (visualization)
26
GRCh38
25
hg19
Lab
35
AMP-T2D consortium
10
Kyle Gaulton, UCSD
Audit category:
1
inconsistent control read length
month_released!
December, 2017
BIOSAMPLE
ASSAY
45 results
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ChIP-seq
in vitro differentiated cells
adipocyte
20
embryonic stem cell
11
neural progenitor cell
7
pancreatic endoderm
3
definitive endodermal cell
1
endocrine cell
1
posterior foregut
1
primitive gut cell
1
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