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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
17
ChIP-seq
Assay category
17
DNA binding
Target of assay
33
histone
33
histone modification
25
transcription factor
17
broad histone mark
16
narrow histone mark
13
chromatin remodeller
6
RNA binding protein
1
recombinant protein
Date released
6
November, 2017
5
August, 2017
5
December, 2017
1
February, 2018
Available data
17
bam
17
bigWig
17
fastq
16
bed narrowPeak
10
bigBed narrowPeak
8
bed broadPeak
8
tagAlign
7
bigBed broadPeak
5
bed bed3+
Organism
16
Homo sapiens
Biosample type
6
cell line
5
in vitro differentiated cells
4
tissue
1
primary cell
1
stem cell
Organ
6
liver
4
pancreas
1
embryo
Project
17
AMP
Genome assembly (visualization)
17
hg19
16
GRCh38
Lab
17
AMP-T2D consortium
Audit category:
15
inconsistent control read length
2
inconsistent assembly
BIOSAMPLE
ASSAY
17 results
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ChIP-seq
cell line
HepG2
6
in vitro differentiated cells
definitive endodermal cell
2
Posterior foregut
1
pancreatic endoderm
1
primitive gut cell
1
tissue
pancreas
4
primary cell
skeletal muscle myoblast
1
stem cell
hESC
1
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