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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
81
ChIP-seq
Assay category
81
DNA binding
Target of assay
163
histone
163
histone modification
82
narrow histone mark
81
broad histone mark
34
control
24
transcription factor
6
RNA binding protein
5
nucleotide modification
Date released
60
August, 2017
10
May, 2021
5
October, 2017
4
November, 2017
2
August, 2021
Available data
289
bigWig
288
bed narrowPeak
bam
221
bigBed narrowPeak
96
tagAlign
85
fastq
28
bed broadPeak
11
bed bed3+
8
bigBed broadPeak
Organism
81
Homo sapiens
Biosample type
61
tissue
primary cell
19
in vitro differentiated cells
1
cell line
Organ
28
connective tissue
20
adipose tissue
13
liver
12
musculature of body
9
brain
8
pancreas
Project
81
AMP
Genome assembly (visualization)
13
hg19
Lab
70
AMP-T2D consortium
10
Kyle Gaulton, UCSD
1
Bing Ren, UCSD
Audit category:
1
missing controlled_by
biosample_type!
primary cell
files.file_type!
bam
BIOSAMPLE
ASSAY
81 results
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ChIP-seq
tissue
subcutaneous abdominal adipose tissue
20
liver
12
skeletal muscle tissue
12
islet of Langerhans
8
brain
5
+ See 2 more…
in vitro differentiated cells
embryonic stem cell
10
adipocyte
8
neural progenitor cell
1
cell line
HepG2
1
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