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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
19
ChIP-seq
3
MeRIP-seq
Assay category
19
DNA binding
Target of assay
27
histone
27
histone modification
14
narrow histone mark
13
broad histone mark
9
control
4
transcription factor
3
RNA binding protein
3
nucleotide modification
1
chromatin remodeller
Date released
10
December, 2017
8
November, 2019
3
November, 2020
1
May, 2021
Available data
19
bam
13
bed narrowPeak
13
bigWig
10
fastq
7
bigBed narrowPeak
1
tagAlign
Organism
22
Homo sapiens
Biosample type
primary cell
11
cell line
11
in vitro differentiated cells
Organ
148
liver
95
brain
92
pancreas
75
heart
72
connective tissue
54
blood vessel
54
vasculature
51
limb
44
adipose tissue
27
nerve
23
artery
22
epithelium
20
musculature of body
19
kidney
12
spleen
11
embryo
6
blood
6
bodily fluid
Project
22
AMP
Genome assembly (visualization)
13
GRCh38
13
hg19
Lab
19
AMP-T2D consortium
3
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
13
inconsistent ontology term
biosample_type!
primary cell
BIOSAMPLE
ASSAY
22 results
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ChIP-seq
MeRIP-seq
cell line
EndoC_BH1
8
3
in vitro differentiated cells
hepatocyte
8
Hepatic endoderm
2
pancreatic PP cell
1
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