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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
139
ChIP-seq
Assay category
139
DNA binding
Target of assay
306
histone
306
histone modification
167
narrow histone mark
139
broad histone mark
65
control
8
transcription factor
Date released
44
May, 2021
41
November, 2017
37
August, 2017
10
October, 2017
7
August, 2021
Available data
334
bigWig
332
bed narrowPeak
308
bam
212
bigBed narrowPeak
139
tagAlign
66
fastq
28
bed broadPeak
16
bigBed broadPeak
6
bed bed3+
Organism
139
Homo sapiens
Biosample type
68
tissue
51
primary cell
14
in vitro differentiated cells
6
cell line
Organ
45
brain
18
liver
12
connective tissue
8
musculature of body
pancreas
4
adipose tissue
1
epithelium
Project
95
AMP
44
T1D
Genome assembly (visualization)
98
GRCh38
77
hg19
Lab
95
AMP-T2D consortium
44
Kyle Gaulton, UCSD
Audit category:
3
missing controlled_by
Audit category:
6
inconsistent control read length
1
inconsistent assembly
organ_slims!
pancreas
BIOSAMPLE
ASSAY
139 results
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ChIP-seq
tissue
liver
11
brain
10
caudate nucleus
8
layer of hippocampus
8
skeletal muscle tissue
8
+ See 4 more…
primary cell
monocyte
44
skeletal muscle myoblast
6
hepatocyte
1
in vitro differentiated cells
adipocyte
8
neural progenitor cell
6
cell line
HepG2
6
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