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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
58
ChIP-seq
Assay category
58
DNA binding
Target of assay
123
histone
123
histone modification
65
narrow histone mark
58
broad histone mark
32
control
10
RNA binding protein
10
transcription factor
1
chromatin remodeller
Date released
17
September, 2018
16
August, 2017
12
October, 2019
8
June, 2019
2
May, 2019
2
May, 2021
1
August, 2021
Available data
56
bam
54
bigWig
48
bed narrowPeak
33
fastq
21
bigBed narrowPeak
8
bed broadPeak
8
bigBed broadPeak
7
tagAlign
1
bed bed3+
Organism
58
Homo sapiens
Biosample type
284
tissue
58
primary cell
46
in vitro differentiated cells
19
cell line
1
stem cell
Organ
31
epithelium
27
pancreas
9
blood vessel
9
vasculature
9
vein
5
kidney
4
connective tissue
4
musculature of body
1
liver
Project
58
AMP
Genome assembly (visualization)
54
hg19
52
GRCh38
Lab
Kyle Gaulton, UCSD
58
AMP-T2D consortium
Audit category:
8
inconsistent ontology term
Audit category:
21
missing controlled_by
Audit category:
1
inconsistent assembly
lab.title!
Kyle Gaulton, UCSD
month_released!
October, 2018
BIOSAMPLE
ASSAY
58 results
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ChIP-seq
primary cell
pancreatic endocrine cell
11
endothelial cell of umbilical vein
9
pancreatic ductal cell
6
skeletal muscle myoblast
6
mesenchymal stem cell
4
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