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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
109
ChIP-seq
Assay category
109
DNA binding
Target of assay
199
histone modification
198
histone
109
broad histone mark
88
narrow histone mark
50
control
47
transcription factor
8
RNA binding protein
3
chromatin remodeller
Date released
109
August, 2017
76
May, 2021
58
May, 2019
55
October, 2019
50
November, 2017
April, 2019
20
May, 2024
19
October, 2018
17
September, 2018
15
December, 2017
10
October, 2017
9
August, 2021
8
February, 2018
8
June, 2019
6
November, 2019
4
January, 2019
Available data
61
bigWig
56
bed narrowPeak
49
bam
49
fastq
45
tagAlign
22
bed broadPeak
18
bigBed narrowPeak
6
bed bed3+
6
bigBed broadPeak
Organism
105
Homo sapiens
Biosample type
73
tissue
20
in vitro differentiated cells
16
primary cell
Organ
40
connective tissue
32
pancreas
20
adipose tissue
19
liver
12
musculature of body
6
epithelium
Project
109
AMP
Genome assembly (visualization)
61
hg19
49
GRCh38
Lab
109
AMP-T2D consortium
Audit category:
5
missing controlled_by
Audit category:
3
inconsistent control read length
2
inconsistent assembly
month_released!
April, 2019
BIOSAMPLE
ASSAY
109 results
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Clear Filters
ChIP-seq
tissue
subcutaneous abdominal adipose tissue
20
liver
19
islet of Langerhans
14
skeletal muscle tissue
12
pancreas
8
in vitro differentiated cells
adipocyte
20
primary cell
skeletal muscle myoblast
6
pancreatic endocrine cell
4
pancreatic alpha cell
3
pancreatic beta cell
3
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