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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
117
ChIP-seq
Assay category
117
DNA binding
Target of assay
227
histone
227
histone modification
117
broad histone mark
110
narrow histone mark
32
control
8
RNA binding protein
8
transcription factor
1
chromatin remodeller
Date released
66
May, 2021
17
September, 2018
16
August, 2017
9
October, 2019
8
June, 2019
1
August, 2021
Available data
113
bigWig
107
bed narrowPeak
95
bam
51
tagAlign
33
fastq
19
bigBed narrowPeak
8
bed broadPeak
8
bigBed broadPeak
1
bed bed3+
Organism
117
Homo sapiens
Biosample type
273
tissue
117
primary cell
56
in vitro differentiated cells
19
cell line
1
stem cell
Organ
31
epithelium
27
pancreas
9
blood vessel
9
vasculature
9
vein
kidney
4
connective tissue
4
musculature of body
1
liver
Project
73
AMP
44
T1D
Genome assembly (visualization)
113
hg19
91
GRCh38
Lab
64
Kyle Gaulton, UCSD
53
AMP-T2D consortium
Audit category:
8
inconsistent ontology term
Audit category:
21
missing controlled_by
Audit category:
1
inconsistent assembly
organ_slims!
kidney
BIOSAMPLE
ASSAY
117 results
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ChIP-seq
primary cell
monocyte
44
CD8-positive, alpha-beta T cell
20
pancreatic endocrine cell
11
endothelial cell of umbilical vein
9
pancreatic ductal cell
6
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