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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
279
ChIP-seq
Assay category
279
DNA binding
Target of assay
587
histone modification
586
histone
307
narrow histone mark
279
broad histone mark
179
control
83
transcription factor
23
RNA binding protein
2
chromatin remodeller
2
nucleotide modification
Date released
73
August, 2017
56
May, 2019
42
November, 2017
39
October, 2019
37
April, 2019
19
October, 2018
10
October, 2017
3
December, 2017
Available data
229
bed narrowPeak
229
bigWig
218
bam
200
bigBed narrowPeak
76
tagAlign
41
fastq
20
bed broadPeak
6
bed bed3+
Organism
275
Homo sapiens
Biosample type
279
tissue
122
primary cell
56
in vitro differentiated cells
19
cell line
1
stem cell
Organ
70
brain
41
pancreas
37
heart
36
blood vessel
36
vasculature
34
limb
25
liver
20
adipose tissue
20
connective tissue
16
musculature of body
16
nerve
14
artery
10
kidney
spleen
Project
279
AMP
Genome assembly (visualization)
218
GRCh38
194
hg19
Lab
279
AMP-T2D consortium
Audit category:
4
missing controlled_by
Audit category:
3
inconsistent control read length
1
inconsistent assembly
organ_slims!
spleen
BIOSAMPLE
ASSAY
279 results
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ChIP-seq
tissue
liver
22
subcutaneous abdominal adipose tissue
20
tibial nerve
16
heart left ventricle
15
islet of Langerhans
14
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