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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
132
ChIP-seq
Assay category
132
DNA binding
Target of assay
237
histone
237
histone modification
122
broad histone mark
narrow histone mark
35
control
10
RNA binding protein
10
transcription factor
1
chromatin remodeller
Date released
66
May, 2021
18
August, 2017
17
September, 2018
12
June, 2019
12
October, 2019
3
May, 2019
3
November, 2017
1
August, 2021
Available data
128
bigWig
122
bed narrowPeak
110
bam
51
tagAlign
38
fastq
31
bigBed narrowPeak
13
bed broadPeak
13
bigBed broadPeak
1
bed bed3+
Organism
132
Homo sapiens
Biosample type
397
tissue
380
cell line
132
primary cell
105
in vitro differentiated cells
1
stem cell
Organ
36
epithelium
27
pancreas
11
vasculature
10
blood vessel
9
vein
7
kidney
5
connective tissue
4
musculature of body
3
brain
1
eye
1
heart
1
liver
Project
88
AMP
44
T1D
Genome assembly (visualization)
128
hg19
105
GRCh38
Lab
68
AMP-T2D consortium
64
Kyle Gaulton, UCSD
Audit category:
11
inconsistent ontology term
Audit category:
21
missing controlled_by
Audit category:
1
inconsistent assembly
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
132 results
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ChIP-seq
primary cell
monocyte
44
CD8-positive, alpha-beta T cell
20
pancreatic endocrine cell
11
endothelial cell of umbilical vein
9
skeletal muscle myoblast
8
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