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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
71
ChIP-seq
3
MeRIP-seq
Assay category
71
DNA binding
Target of assay
93
histone
93
histone modification
49
narrow histone mark
44
broad histone mark
30
control
9
transcription factor
8
RNA binding protein
3
nucleotide modification
1
chromatin remodeller
Date released
18
August, 2017
15
October, 2019
10
December, 2017
10
September, 2018
8
November, 2019
3
May, 2019
3
November, 2020
2
August, 2021
2
June, 2019
2
November, 2017
1
May, 2021
Available data
71
bam
44
bigWig
40
bed narrowPeak
40
fastq
14
bigBed narrowPeak
3
tagAlign
2
bed broadPeak
2
bigBed broadPeak
1
bed bed3+
Organism
74
Homo sapiens
Biosample type
52
primary cell
11
cell line
11
in vitro differentiated cells
Organ
150
liver
131
pancreas
101
brain
79
connective tissue
74
epithelium
67
vasculature
66
blood vessel
57
heart
51
limb
44
adipose tissue
27
kidney
27
nerve
26
musculature of body
23
artery
12
spleen
11
embryo
11
vein
6
blood
6
bodily fluid
1
eye
Project
74
AMP
Genome assembly (visualization)
44
hg19
40
GRCh38
Lab
71
AMP-T2D consortium
3
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
15
inconsistent ontology term
Audit category:
10
missing controlled_by
BIOSAMPLE
ASSAY
74 results
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Clear Filters
ChIP-seq
MeRIP-seq
primary cell
endothelial cell of umbilical vein
11
pancreatic alpha cell
9
pancreatic beta cell
9
pancreatic ductal cell
6
epithelial cell of proximal tubule
5
+ See 6 more…
cell line
EndoC_BH1
8
3
in vitro differentiated cells
hepatocyte
8
Hepatic endoderm
2
pancreatic PP cell
1
See all biosamples
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