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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
85
ChIP-seq
Assay category
85
DNA binding
Target of assay
65
histone
65
histone modification
49
transcription factor
36
broad histone mark
29
narrow histone mark
9
RNA binding protein
5
chromatin remodeller
1
other context
1
other post-translational modification
Date released
57
November, 2017
24
August, 2017
2
October, 2017
2
October, 2019
Available data
898
bigWig
864
bed narrowPeak
863
bam
647
bigBed narrowPeak
572
fastq
156
tagAlign
85
bed broadPeak
65
bigBed broadPeak
31
bed bed3+
3
tar
Organism
81
Homo sapiens
Biosample type
52
cell line
20
tissue
13
primary cell
Organ
52
liver
8
musculature of body
8
pancreas
7
brain
4
epithelium
4
vasculature
3
blood vessel
2
vein
Project
85
AMP
Genome assembly (visualization)
85
hg19
57
GRCh38
Lab
85
AMP-T2D consortium
Audit category:
1
missing controlled_by
Audit category:
8
inconsistent control read length
2
inconsistent assembly
BIOSAMPLE
ASSAY
85 results
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ChIP-seq
cell line
HepG2
52
tissue
skeletal muscle tissue
8
islet of Langerhans
4
pancreas
4
brain
2
cingulate gyrus
1
+ See 1 more…
primary cell
skeletal muscle myoblast
8
endothelial cell of umbilical vein
2
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
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