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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
59
ChIP-seq
Assay category
59
DNA binding
Target of assay
112
histone
112
histone modification
56
broad histone mark
55
narrow histone mark
49
transcription factor
37
control
11
RNA binding protein
3
chromatin remodeller
Date released
22
August, 2017
12
December, 2017
10
May, 2021
8
February, 2018
7
August, 2021
Available data
40
bam
40
bed narrowPeak
40
bigWig
34
fastq
14
tagAlign
8
bigBed narrowPeak
4
bed bed3+
Organism
59
Homo sapiens
Biosample type
285
tissue
123
primary cell
59
in vitro differentiated cells
49
cell line
1
stem cell
Organ
22
connective tissue
8
epithelium
8
liver
4
embryo
Project
59
AMP
Genome assembly (visualization)
40
GRCh38
39
hg19
Lab
49
AMP-T2D consortium
10
Kyle Gaulton, UCSD
Audit category:
7
inconsistent control read length
BIOSAMPLE
ASSAY
59 results
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ChIP-seq
in vitro differentiated cells
adipocyte
22
embryonic stem cell
11
hepatocyte
8
neural progenitor cell
7
pancreatic endoderm
4
definitive endodermal cell
2
primitive gut cell
2
Posterior foregut
1
endocrine cell
1
posterior foregut
1
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