Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
49
ChIP-seq
Assay category
49
DNA binding
Target of assay
361
transcription factor
89
recombinant protein
83
control
65
RNA binding protein
38
histone
38
histone modification
30
chromatin remodeller
19
broad histone mark
narrow histone mark
3
nucleotide modification
2
other context
2
other post-translational modification
Date released
23
November, 2017
7
November, 2018
6
January, 2019
6
November, 2019
4
October, 2019
2
December, 2018
1
August, 2021
Available data
48
bam
48
bigWig
47
bed narrowPeak
40
bigBed narrowPeak
38
fastq
12
bed broadPeak
12
bigBed broadPeak
6
tagAlign
Organism
49
Homo sapiens
Biosample type
305
tissue
123
primary cell
59
in vitro differentiated cells
49
cell line
1
stem cell
Organ
29
liver
10
blood
10
bodily fluid
10
pancreas
6
epithelium
Project
49
AMP
Genome assembly (visualization)
48
hg19
44
GRCh38
Lab
48
AMP-T2D consortium
1
Bing Ren, UCSD
Audit category:
6
inconsistent ontology term
1
inconsistent control
Audit category:
6
missing controlled_by
Audit category:
17
inconsistent control read length
8
inconsistent control run_type
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
49 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
cell line
HepG2
29
GM12878
10
EndoC_BH1
6
Panc1
4
See all biosamples
Download