Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
115
ChIP-seq
Assay category
115
DNA binding
Target of assay
112
histone
112
histone modification
56
broad histone mark
55
narrow histone mark
49
transcription factor
37
control
11
RNA binding protein
3
chromatin remodeller
Date released
39
August, 2017
25
December, 2017
21
May, 2021
16
February, 2018
14
August, 2021
Available data
82
bam
81
bed narrowPeak
81
bigWig
68
fastq
26
tagAlign
13
bigBed narrowPeak
8
bed bed3+
Organism
115
Homo sapiens
Biosample type
595
tissue
238
primary cell
115
in vitro differentiated cells
68
cell line
2
stem cell
Organ
39
connective tissue
16
epithelium
13
liver
12
embryo
1
pancreas
Project
115
AMP
Genome assembly (visualization)
81
GRCh38
80
hg19
Lab
95
AMP-T2D consortium
20
Kyle Gaulton, UCSD
Audit category:
2
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
9
inconsistent control read length
BIOSAMPLE
ASSAY
115 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
in vitro differentiated cells
adipocyte
39
embryonic stem cell
22
neural progenitor cell
14
hepatocyte
13
pancreatic endoderm
10
definitive endodermal cell
4
primitive gut cell
4
Hepatic endoderm
2
Posterior foregut
2
endocrine cell
2
posterior foregut
2
pancreatic PP cell
1
See all biosamples
Download