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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
19
ChIP-seq
Assay category
19
DNA binding
Target of assay
346
transcription factor
88
recombinant protein
83
control
59
RNA binding protein
27
histone
27
histone modification
19
chromatin remodeller
14
narrow histone mark
13
broad histone mark
3
nucleotide modification
2
other context
2
other post-translational modification
Date released
9
November, 2017
6
January, 2019
2
December, 2018
2
November, 2018
Available data
19
bam
19
bed narrowPeak
19
bigBed narrowPeak
19
bigWig
19
fastq
3
bed broadPeak
3
bigBed broadPeak
Organism
19
Homo sapiens
Biosample type
19
cell line
2
tissue
1
in vitro differentiated cells
1
primary cell
Organ
10
blood
10
bodily fluid
9
liver
Project
19
AMP
Genome assembly (visualization)
19
hg19
18
GRCh38
Lab
19
AMP-T2D consortium
Audit category:
1
inconsistent control
Audit category:
1
missing controlled_by
Audit category:
inconsistent control read length
8
inconsistent control run_type
audit.WARNING.category!
inconsistent control read length
BIOSAMPLE
ASSAY
19 results
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ChIP-seq
cell line
GM12878
10
HepG2
9
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